Note of Cancer (TCGA) Data Analysis
Introduction
Timeline of Genome
TCGA Project (2005-2017)
DataDownload
Code
2018 The Pan-Cancer Atlas @Cell
Cell of Origin Patterns
Cell-of-Origin
GI Adenocarcinomas
Gynecologic and Breast Cancers
Oncogenic Processes
OncogenicProcesses
ImmuneLandscape.md
Epigenetic
Signaling Pathways
SignalingPathways
2020 Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium @Nature
Machine Learning
Oncogenic Dedifferentiatio
Pathway Activation
Items
Analysis of regulation
Aneuploidy 非整倍體
CNV: Copy Number 單染色體拷貝數
Epigenetic
Gene Expression
Immune Cells
Lymphocytes
B cell
Plasma Cell
Memory B Cell
T cell
Th cell: CD4+ cells
Tc cell: CD8+ cells
NK Natural Killer cell
Granulocytes
Neutrophils
Eosinophils
Basophils
Mast Cells
Monocyte
Dendritic Cells
Macrophage
Interferons
NCBI
SNP: single-nucleotide polymorphism
Tools
TCGA Code Tables
BCR Batch Codes
Center Codes
Data Levels
Data Types
Platform Codes
Portion / Analyte Codes
Sample Type Codes
TCGA Study Abbreviations
Tissue Source Site
Tissue Source Site: A-Z Source Site
Tissue Source Site: A-Z Study Name
TCGA Tag Descriptions
Clinical Data
Copy Number Variation
Gene Expression Data
Methylation Data
miRNA Data
Other Data
Infograohic
Web TCGA
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CNV: Copy Number 單染色體拷貝數
Copy Number 單染色體拷貝數
拷貝數變異（Copy number variation, CNV）
Reference:
Copy-number variation - Wikipedia
Genomic and Functional Approaches to Understanding Cancer Aneuploidy
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